iterations/neb0_image07_iter67.sci output for 3: !!! 3.3A-->1.3A 709 (amd-9) Si-H2N...HCH2-Si two dimer (TSS)
Status: terminated#MD System 2.0 @Title neb0_image07 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.220815557632 0.525795473701 0.336009658468} C1 1 1 14 {} {0.273559554961 0.487941920286 0.293826614245} Si1 2 1 14 {} {0.174579840733 0.534721540727 0.255958847029} Si2 3 1 8 {} {0.287482970611 0.51890070767 0.195612847527} O1 4 1 8 {} {0.309449044276 0.512451629339 0.370271406102} O2 5 1 6 {} {0.273709191298 0.395054118133 0.28885411295} C2 6 1 6 {} {0.143565867335 0.4546234046 0.237838107882} C3 7 1 8 {} {0.199164015382 0.561851106864 0.162085935133} O3 8 1 8 {} {0.138856503241 0.594894481353 0.284604584702} O4 9 1 14 {} {0.361985504902 0.536033714679 0.370032458384} Si3 10 1 7 {} {0.394182124587 0.467450636407 0.404572643612} N1 11 1 14 {} {0.445276698692 0.469405470108 0.346747932932} Si4 12 1 14 {} {0.379333058097 0.417875073632 0.494794732433} Si5 13 1 7 {} {0.3520554025 0.458765480068 0.580122037929} N2 14 1 7 {} {0.453446713554 0.552586616969 0.324061561032} N3 15 1 1 {} {0.210045542515 0.497309802194 0.395095974563} H1 16 1 1 {} {0.230050265365 0.576206254846 0.359850524148} H2 17 1 1 {} {0.262969537707 0.541704120912 0.165289967835} H3 18 1 1 {} {0.268491410986 0.372090663777 0.35457113651} H4 19 1 1 {} {0.305505249548 0.376271051331 0.262276226182} H5 20 1 1 {} {0.247197615291 0.377850758853 0.243937693232} H6 21 1 1 {} {0.116997286912 0.460686041225 0.187766790281} H7 22 1 1 {} {0.128064868697 0.437404123983 0.300517196834} H8 23 1 1 {} {0.165959608354 0.414459463025 0.214776108139} H9 24 1 1 {} {0.180550288574 0.583760669858 0.118638205103} H10 25 1 1 {} {0.110937919811 0.581183127248 0.310632278931} H11 26 1 1 {} {0.375095279399 0.556234777424 0.278244184586} H12 27 1 1 {} {0.367162425888 0.593816905267 0.43108723121} H13 28 1 1 {} {0.480578067425 0.4429780209 0.404027420488} H14 29 1 1 {} {0.448013909008 0.431333730433 0.263078918814} H15 30 1 1 {} {0.348148471541 0.366330613699 0.461913283772} H16 31 1 1 {} {0.420257719132 0.387544476855 0.532655326852} H17 32 1 1 {} {0.320102028682 0.47459547788 0.570469713297} H18 33 1 1 {} {0.3685604604 0.488149307086 0.624453939407} H19 34 1 1 {} {0.482536836546 0.572510879751 0.317961264589} H20 35 1 1 {} {0.435847418856 0.585824025473 0.357225525041} H21 36 1 6 {} {0.651068186595 0.64605246584 0.476672996711} C4 37 1 14 {} {0.610772707523 0.577858936198 0.441213428615} Si6 38 1 14 {} {0.639623363287 0.730267841896 0.429237546427} Si7 39 1 8 {} {0.591065959671 0.588258725476 0.33832122018} O5 40 1 8 {} {0.62922378194 0.500555365896 0.451707660454} O6 41 1 6 {} {0.561106531767 0.581891484246 0.516375145789} C5 42 1 6 {} {0.590073433871 0.775457094354 0.47532273183} C6 43 1 8 {} {0.633637166806 0.716652448346 0.320556084738} O7 44 1 8 {} {0.684139340342 0.777101985958 0.441567126623} O8 45 1 14 {} {0.631915394347 0.421684280504 0.425399577291} Si8 46 1 7 {} {0.584151449571 0.373037423181 0.44145672524} N4 47 1 14 {} {0.564913229622 0.323393380467 0.355394906978} Si9 48 1 14 {} {0.560173743653 0.36820559899 0.550287232194} Si10 49 1 7 {} {0.59607795816 0.386179891127 0.636094461573} N5 50 1 7 {} {0.598586906769 0.259767323329 0.31561082801} N6 51 1 1 {} {0.645422865144 0.646199701192 0.549333507946} H22 52 1 1 {} {0.686244451339 0.633755970522 0.469187862686} H23 53 1 1 {} {0.603967318642 0.624752093273 0.303477585896} H24 54 1 1 {} {0.567865489129 0.592034896851 0.584395187117} H25 55 1 1 {} {0.54837661112 0.531480871562 0.51438295342} H26 56 1 1 {} {0.535922273261 0.614847049106 0.492657632333} H27 57 1 1 {} {0.588749821868 0.825686293203 0.445524925106} H28 58 1 1 {} {0.591099330442 0.782372008205 0.54799881955} H29 59 1 1 {} {0.558057352682 0.751642965727 0.459695346696} H30 60 1 1 {} {0.639206611538 0.75373292897 0.280378899522} H31 61 1 1 {} {0.685010402632 0.808025872472 0.491652010577} H32 62 1 1 {} {0.641041144024 0.416890713973 0.327131137468} H33 63 1 1 {} {0.669921879415 0.39832321711 0.478595806531} H34 64 1 1 {} {0.52288750446 0.290620962786 0.387163264885} H35 65 1 1 {} {0.5559731395 0.365613146892 0.274371236587} H36 66 1 1 {} {0.523220995683 0.41659075447 0.559914378561} H37 67 1 1 {} {0.542660624874 0.298038182579 0.560317608144} H38 68 1 1 {} {0.600936490161 0.434383591239 0.652348039365} H39 69 1 1 {} {0.622989527131 0.358106606428 0.649969465964} H40 70 1 1 {} {0.623296053916 0.270568179311 0.270837182615} H41 71 1 1 {} {0.607764545144 0.220676946544 0.355395063231} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end