iterations/neb0_image07_iter45.sci output for 3: !!! 3.3A-->1.3A 709 (amd-9) Si-H2N...HCH2-Si two dimer (TSS)
Status: terminated#MD System 2.0 @Title neb0_image07 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.220210233899 0.526162151829 0.334159308266} C1 1 1 14 {} {0.273795840268 0.488884879849 0.292344996603} Si1 2 1 14 {} {0.173650761386 0.534594820904 0.25343806896} Si2 3 1 8 {} {0.28649625361 0.520174800895 0.193574355616} O1 4 1 8 {} {0.312861568223 0.511207373694 0.363965066486} O2 5 1 6 {} {0.272383782715 0.395618890495 0.286242118703} C2 6 1 6 {} {0.142231680742 0.454818679787 0.23580878293} C3 7 1 8 {} {0.198072041026 0.561471426676 0.159804827084} O3 8 1 8 {} {0.138226431985 0.594844630743 0.281847298924} O4 9 1 14 {} {0.364683194323 0.538379992696 0.367565716814} Si3 10 1 7 {} {0.396493722671 0.471792922871 0.408156357069} N1 11 1 14 {} {0.446079892912 0.468471542904 0.349746973005} Si4 12 1 14 {} {0.378987865238 0.419639956049 0.494823422768} Si5 13 1 7 {} {0.35031573338 0.458213536385 0.58045535116} N2 14 1 7 {} {0.447812872488 0.56172114004 0.326702273079} N3 15 1 1 {} {0.208818169898 0.497451180791 0.392672432551} H1 16 1 1 {} {0.228566855511 0.576823318042 0.358222319144} H2 17 1 1 {} {0.261459103495 0.542174168883 0.163384761083} H3 18 1 1 {} {0.267128489385 0.372243439077 0.351724098863} H4 19 1 1 {} {0.304064749107 0.376372272467 0.259545267807} H5 20 1 1 {} {0.245614150484 0.378782232337 0.241365359544} H6 21 1 1 {} {0.115691912394 0.461150361209 0.185772537726} H7 22 1 1 {} {0.126608235894 0.43737695387 0.298156294281} H8 23 1 1 {} {0.164478563705 0.414701274194 0.212458610605} H9 24 1 1 {} {0.17925125656 0.583761814497 0.116036910956} H10 25 1 1 {} {0.109760877078 0.582110588232 0.307497565178} H11 26 1 1 {} {0.380882196872 0.557699150676 0.278295869625} H12 27 1 1 {} {0.365132579366 0.596740667933 0.430130523408} H13 28 1 1 {} {0.478712980559 0.431717946864 0.413908220367} H14 29 1 1 {} {0.453683564906 0.440734764661 0.259694198428} H15 30 1 1 {} {0.347769884986 0.369648900612 0.454474724696} H16 31 1 1 {} {0.419685548527 0.386653513413 0.532142964422} H17 32 1 1 {} {0.319113185676 0.47551759281 0.568044264693} H18 33 1 1 {} {0.366432310979 0.489534065704 0.622988741842} H19 34 1 1 {} {0.489125966498 0.562088053078 0.318952678685} H20 35 1 1 {} {0.440922173503 0.583097170885 0.390149493884} H21 36 1 6 {} {0.648074366445 0.642789397875 0.47812013873} C4 37 1 14 {} {0.609625839198 0.579737496254 0.440107857655} Si6 38 1 14 {} {0.63886229087 0.728048240778 0.432266181506} Si7 39 1 8 {} {0.593802401625 0.586803168883 0.332123964461} O5 40 1 8 {} {0.624060423507 0.50120968137 0.454208212417} O6 41 1 6 {} {0.560875310492 0.586899034075 0.512848564285} C5 42 1 6 {} {0.590094792645 0.776694500648 0.477982016541} C6 43 1 8 {} {0.633293111964 0.715788882003 0.322226111526} O7 44 1 8 {} {0.68568911795 0.771106862681 0.447224834681} O8 45 1 14 {} {0.631396537412 0.422592356381 0.427602154498} Si8 46 1 7 {} {0.585311713894 0.370947894079 0.443910799108} N4 47 1 14 {} {0.566080870174 0.321843409656 0.356646447622} Si9 48 1 14 {} {0.56100774145 0.367710196441 0.552564374607} Si10 49 1 7 {} {0.596746713426 0.386434225373 0.636435994534} N5 50 1 7 {} {0.60029319468 0.258351016148 0.317239832262} N6 51 1 1 {} {0.638148494373 0.641707480797 0.549521177808} H22 52 1 1 {} {0.682608260614 0.626664032042 0.467947627211} H23 53 1 1 {} {0.607955943224 0.624834346604 0.300467517379} H24 54 1 1 {} {0.558532314604 0.584628527586 0.586686078459} H25 55 1 1 {} {0.555288862916 0.530923192671 0.486638161953} H26 56 1 1 {} {0.536143121056 0.624345131783 0.481531879729} H27 57 1 1 {} {0.589263187274 0.827188042477 0.448314180056} H28 58 1 1 {} {0.591998799748 0.782712997162 0.550938453514} H29 59 1 1 {} {0.557785443888 0.75314744644 0.462848929084} H30 60 1 1 {} {0.640989464266 0.752889171794 0.283678028354} H31 61 1 1 {} {0.68559380044 0.804436087567 0.493743289439} H32 62 1 1 {} {0.642147618943 0.418269597365 0.329488398779} H33 63 1 1 {} {0.670517867013 0.402663543477 0.481986908144} H34 64 1 1 {} {0.524210403077 0.290030064465 0.389409155463} H35 65 1 1 {} {0.557667579852 0.365086980729 0.277056081956} H36 66 1 1 {} {0.524003846679 0.417176613247 0.561981181467} H37 67 1 1 {} {0.543539805852 0.297827641312 0.563322604081} H38 68 1 1 {} {0.602188131133 0.434921534867 0.653764999171} H39 69 1 1 {} {0.623648295512 0.357422287741 0.652262116962} H40 70 1 1 {} {0.625096115768 0.270206359761 0.274017045803} H41 71 1 1 {} {0.609931420579 0.220889295947 0.358443984512} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end