iterations/neb0_image07_iter39.sci output for 3: !!! 3.3A-->1.3A 709 (amd-9) Si-H2N...HCH2-Si two dimer (TSS)
Status: terminated#MD System 2.0 @Title neb0_image07 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.234645545386 0.525126899349 0.35649638683} C1 1 1 14 {} {0.286040078282 0.486057418356 0.315495718876} Si1 2 1 14 {} {0.189041068793 0.53293336615 0.277126377133} Si2 3 1 8 {} {0.299258672126 0.504257485498 0.209890032534} O1 4 1 8 {} {0.319318963101 0.521593289247 0.390762891944} O2 5 1 6 {} {0.288324470345 0.392170046287 0.314770387741} C2 6 1 6 {} {0.158476177911 0.45280901596 0.260930589457} C3 7 1 8 {} {0.213257956015 0.566620559369 0.188917366187} O3 8 1 8 {} {0.15348810095 0.587106558498 0.316084148942} O4 9 1 14 {} {0.373624306177 0.537186016963 0.384627395468} Si3 10 1 7 {} {0.385013019074 0.446730433954 0.419554109145} N1 11 1 14 {} {0.403129082792 0.427959772021 0.24609448291} Si4 12 1 14 {} {0.387828409553 0.408722484106 0.528605773331} Si5 13 1 7 {} {0.361452770422 0.451413074232 0.616716563656} N2 14 1 7 {} {0.275260022353 0.611359891992 0.0292401298582} N3 15 1 1 {} {0.224899564212 0.495547217845 0.415231365981} H1 16 1 1 {} {0.246758551027 0.574551741913 0.379761486114} H2 17 1 1 {} {0.27770572532 0.53970994875 0.18278589366} H3 18 1 1 {} {0.282429482382 0.365860271536 0.377571752107} H4 19 1 1 {} {0.319697481023 0.370950552702 0.288913677868} H5 20 1 1 {} {0.261600842608 0.376744630993 0.268988232632} H6 21 1 1 {} {0.131864159577 0.460266514241 0.211002171168} H7 22 1 1 {} {0.142258351742 0.437483807289 0.324412502133} H8 23 1 1 {} {0.179659357178 0.410699022144 0.239381001469} H9 24 1 1 {} {0.191829773839 0.583995200386 0.140757369858} H10 25 1 1 {} {0.124008385999 0.572026174789 0.339145304232} H11 26 1 1 {} {0.387731083113 0.552232078991 0.30031695692} H12 27 1 1 {} {0.384120268528 0.591483405796 0.456230155447} H13 28 1 1 {} {0.492653051432 0.49864170706 0.383487622723} H14 29 1 1 {} {0.447215291596 0.337384432017 0.202648521713} H15 30 1 1 {} {0.358016829876 0.352867538236 0.490221106707} H16 31 1 1 {} {0.435628075452 0.383221355409 0.554472455813} H17 32 1 1 {} {0.333394343953 0.473892337489 0.595712651417} H18 33 1 1 {} {0.378094975061 0.488445452381 0.649760261458} H19 34 1 1 {} {0.432970950947 0.520963839223 0.280729807832} H20 35 1 1 {} {0.184876282069 0.629908756393 0.111298365443} H21 36 1 6 {} {0.68502975108 0.662456663004 0.452854096879} C4 37 1 14 {} {0.654682270316 0.605750279684 0.475988600077} Si6 38 1 14 {} {0.632443336682 0.73942177395 0.400866960207} Si7 39 1 8 {} {0.55030299378 0.60575512767 0.383146517175} O5 40 1 8 {} {0.6349736197 0.503698647555 0.427837489632} O6 41 1 6 {} {0.661168106926 0.621597891808 0.705210201333} C5 42 1 6 {} {0.576050597376 0.777393570728 0.452745543019} C6 43 1 8 {} {0.618833459358 0.71901018444 0.293209068358} O7 44 1 8 {} {0.674036804146 0.796025840023 0.410666624057} O8 45 1 14 {} {0.620975318653 0.420764095723 0.409770630609} Si8 46 1 7 {} {0.569630086782 0.37124699562 0.411056744518} N4 47 1 14 {} {0.552424927866 0.324539776484 0.334921074571} Si9 48 1 14 {} {0.548768044039 0.368908419474 0.538973033399} Si10 49 1 7 {} {0.58642670786 0.387485817391 0.599226469436} N5 50 1 7 {} {0.581552640042 0.254334953684 0.28092808777} N6 51 1 1 {} {0.639800554825 0.64701559873 0.513735940328} H22 52 1 1 {} {0.722946778309 0.666644318306 0.458471757762} H23 53 1 1 {} {0.576426300001 0.615124916961 0.287570436978} H24 54 1 1 {} {0.640853163323 0.666711054925 0.789811460891} H25 55 1 1 {} {0.763179013252 0.442846641831 0.722957828867} H26 56 1 1 {} {0.568260515618 0.573654744257 0.541973685938} H27 57 1 1 {} {0.574396053425 0.828468365103 0.421126629357} H28 58 1 1 {} {0.576730712558 0.786752401251 0.525961980918} H29 59 1 1 {} {0.542076376473 0.757953149009 0.437982683258} H30 60 1 1 {} {0.624004043357 0.753766950903 0.25055078457} H31 61 1 1 {} {0.671165372393 0.817211292712 0.469714735152} H32 62 1 1 {} {0.62619177208 0.420048844246 0.302081383717} H33 63 1 1 {} {0.659389700039 0.402416996694 0.460522353852} H34 64 1 1 {} {0.510125805433 0.292956887314 0.366201238494} H35 65 1 1 {} {0.54252631419 0.368659652765 0.255499544513} H36 66 1 1 {} {0.511513443199 0.419229010648 0.56666949753} H37 67 1 1 {} {0.528560940755 0.295723463909 0.540732751901} H38 68 1 1 {} {0.585064756733 0.434089109843 0.632595787351} H39 69 1 1 {} {0.61289744138 0.359790972945 0.633596220921} H40 70 1 1 {} {0.607323672926 0.271922336582 0.244174639702} H41 71 1 1 {} {0.591374821705 0.219003586916 0.322333953338} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end