iterations/neb0_image06_iter60.sci output for 3: !!! 3.3A-->1.3A 709 (amd-9) Si-H2N...HCH2-Si two dimer (TSS)
Status: terminated#MD System 2.0 @Title neb0_image06 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.217939231923 0.526224908987 0.330105516506} C1 1 1 14 {} {0.271601155373 0.488901951077 0.288858851379} Si1 2 1 14 {} {0.171487107422 0.534753831747 0.25017911833} Si2 3 1 8 {} {0.284185051656 0.518144122672 0.188660753233} O1 4 1 8 {} {0.309036862375 0.51376146508 0.362184186} O2 5 1 6 {} {0.270586427219 0.395429272214 0.284002777502} C2 6 1 6 {} {0.140316078137 0.454972109871 0.231985291319} C3 7 1 8 {} {0.19599824651 0.562645097942 0.15691876779} O3 8 1 8 {} {0.13566994191 0.594727700811 0.279799353711} O4 9 1 14 {} {0.360807774148 0.538215132987 0.36355211969} Si3 10 1 7 {} {0.393256714323 0.471144311291 0.399619574179} N1 11 1 14 {} {0.443595032663 0.471028967526 0.342711235486} Si4 12 1 14 {} {0.376863420705 0.420010833791 0.488501292803} Si5 13 1 7 {} {0.348811915418 0.45855541725 0.575666507138} N2 14 1 7 {} {0.449511487318 0.555096845069 0.32184628245} N3 15 1 1 {} {0.207094864714 0.498023105204 0.389478161504} H1 16 1 1 {} {0.226841522019 0.576807388481 0.353764000531} H2 17 1 1 {} {0.259653412594 0.542146246065 0.159652055359} H3 18 1 1 {} {0.26520621305 0.372186647674 0.34966326747} H4 19 1 1 {} {0.302264524288 0.376188236003 0.257136130091} H5 20 1 1 {} {0.243845422641 0.378632769639 0.23879700566} H6 21 1 1 {} {0.113762063333 0.46156028334 0.182309433932} H7 22 1 1 {} {0.124659699567 0.43815636251 0.294430829896} H8 23 1 1 {} {0.162044488583 0.414257753563 0.208811530831} H9 24 1 1 {} {0.177226049418 0.584434308883 0.113241736537} H10 25 1 1 {} {0.107707451975 0.580551116032 0.305520384569} H11 26 1 1 {} {0.376552654409 0.558342619704 0.274458217181} H12 27 1 1 {} {0.363486791089 0.5962580418 0.427172048816} H13 28 1 1 {} {0.477054935106 0.440312514179 0.402201910123} H14 29 1 1 {} {0.446377729332 0.430612549848 0.254973164786} H15 30 1 1 {} {0.345167785683 0.368199745618 0.455296107324} H16 31 1 1 {} {0.417026166321 0.387823896782 0.529104610742} H17 32 1 1 {} {0.317143251811 0.475675108969 0.565573494871} H18 33 1 1 {} {0.364006238926 0.489948398475 0.619707603362} H19 34 1 1 {} {0.482258062429 0.565343905876 0.313607375535} H20 35 1 1 {} {0.434139715158 0.58848012164 0.369480561015} H21 36 1 6 {} {0.653733531151 0.642040281732 0.48197726042} C4 37 1 14 {} {0.61190836882 0.578166871861 0.445190286973} Si6 38 1 14 {} {0.642842179141 0.727920650156 0.435183798102} Si7 39 1 8 {} {0.593958253938 0.587907893289 0.342096651623} O5 40 1 8 {} {0.630940290422 0.501728385516 0.458576408734} O6 41 1 6 {} {0.562298062191 0.580451239717 0.518252835949} C5 42 1 6 {} {0.592514112283 0.775579100395 0.479456976339} C6 43 1 8 {} {0.637754613778 0.715650853326 0.325038745012} O7 44 1 8 {} {0.688138656382 0.776125582346 0.448226184322} O8 45 1 14 {} {0.634562942388 0.422434638427 0.42997133627} Si8 46 1 7 {} {0.587577911009 0.372652706693 0.448915877909} N4 47 1 14 {} {0.567199154242 0.322326492684 0.358962067682} Si9 48 1 14 {} {0.563207352209 0.366691234034 0.555257812273} Si10 49 1 7 {} {0.598212489857 0.385814700765 0.641656002178} N5 50 1 7 {} {0.6021342781 0.259236470634 0.321187009268} N6 51 1 1 {} {0.645955562156 0.644225564392 0.553798670608} H22 52 1 1 {} {0.690427780625 0.63298713533 0.475414581952} H23 53 1 1 {} {0.607815580728 0.623244544373 0.306766782848} H24 54 1 1 {} {0.569181966148 0.590753231295 0.591326517149} H25 55 1 1 {} {0.54830985348 0.529858901177 0.508186400465} H26 56 1 1 {} {0.538354131685 0.617159131731 0.492706035865} H27 57 1 1 {} {0.591236120023 0.826436606658 0.450511875959} H28 58 1 1 {} {0.594431366184 0.782119629884 0.552399072608} H29 59 1 1 {} {0.559881540868 0.752459665746 0.465168483908} H30 60 1 1 {} {0.64316513543 0.75291343262 0.284728973614} H31 61 1 1 {} {0.687600896701 0.807034040291 0.498734709493} H32 62 1 1 {} {0.644043614571 0.416422463362 0.332924523847} H33 63 1 1 {} {0.67316363838 0.399215257361 0.484636008871} H34 64 1 1 {} {0.525851255337 0.289553808938 0.392676455447} H35 65 1 1 {} {0.559510022017 0.36490636241 0.280255140769} H36 66 1 1 {} {0.525534320199 0.416088971896 0.564926845336} H37 67 1 1 {} {0.545595557704 0.297547459402 0.566162759295} H38 68 1 1 {} {0.604070608 0.434913284096 0.657858347366} H39 69 1 1 {} {0.625881134294 0.357606807663 0.65579147115} H40 70 1 1 {} {0.626383951192 0.269790773133 0.276006148824} H41 71 1 1 {} {0.611116241061 0.219785820483 0.359907281893} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end