iterations/neb0_image02_iter43.sci output for 3: !!! 3.3A-->1.3A 709 (amd-9) Si-H2N...HCH2-Si two dimer (TSS)
Status: terminated#MD System 2.0 @Title neb0_image02 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.205135610224 0.529060329442 0.3095643075} C1 1 1 14 {} {0.258960254739 0.491692230051 0.268387119181} Si1 2 1 14 {} {0.158310978095 0.537129330759 0.228897678624} Si2 3 1 8 {} {0.271416258944 0.523576759397 0.169767504116} O1 4 1 8 {} {0.299370605294 0.51189502947 0.338584755284} O2 5 1 6 {} {0.256979213136 0.398550067794 0.261603973828} C2 6 1 6 {} {0.126732182837 0.457429391778 0.211266522575} C3 7 1 8 {} {0.182537853746 0.562528487259 0.134259807006} O3 8 1 8 {} {0.123161933228 0.598162396256 0.256939986764} O4 9 1 14 {} {0.35068702508 0.541255061033 0.344514952242} Si3 10 1 7 {} {0.385505893758 0.47844676583 0.386104577645} N1 11 1 14 {} {0.439575479441 0.475907030358 0.344078773741} Si4 12 1 14 {} {0.36525618748 0.42400416134 0.468927390396} Si5 13 1 7 {} {0.335571614016 0.461088404487 0.55417136129} N2 14 1 7 {} {0.461571458536 0.555550655871 0.350063383626} N3 15 1 1 {} {0.193571685068 0.500389806657 0.367963084813} H1 16 1 1 {} {0.213227734651 0.579883181086 0.333354205093} H2 17 1 1 {} {0.246399923759 0.54492493801 0.138993283827} H3 18 1 1 {} {0.251737190203 0.374949689535 0.326956888951} H4 19 1 1 {} {0.28864223854 0.379217491496 0.234989503217} H5 20 1 1 {} {0.230224719398 0.381765356861 0.216687160732} H6 21 1 1 {} {0.100347567026 0.464017201318 0.160948611734} H7 22 1 1 {} {0.111040138837 0.439850412479 0.273400489578} H8 23 1 1 {} {0.149127188251 0.417558548236 0.187678542292} H9 24 1 1 {} {0.163993400827 0.58629250876 0.0916302645345} H10 25 1 1 {} {0.0946830410266 0.585574184018 0.282548102287} H11 26 1 1 {} {0.367082593268 0.561326354694 0.25509849978} H12 27 1 1 {} {0.349433651077 0.599794282456 0.405390851613} H13 28 1 1 {} {0.463554786851 0.423645264106 0.396602318022} H14 29 1 1 {} {0.441672682678 0.458442003999 0.247720709334} H15 30 1 1 {} {0.333892032777 0.374900277571 0.428151247356} H16 31 1 1 {} {0.404702349624 0.389446439047 0.5076998444} H17 32 1 1 {} {0.304077137686 0.477627856561 0.542467952157} H18 33 1 1 {} {0.351269930381 0.492311949178 0.597734364633} H19 34 1 1 {} {0.484845316442 0.570669409325 0.304868400012} H20 35 1 1 {} {0.466945826199 0.578435907478 0.409454700061} H21 36 1 6 {} {0.655247397781 0.637369790841 0.502516270562} C4 37 1 14 {} {0.615709482761 0.573332856782 0.455660536999} Si6 38 1 14 {} {0.652585702248 0.723966626473 0.457842036071} Si7 39 1 8 {} {0.612373120878 0.58191336787 0.346031721486} O5 40 1 8 {} {0.635918664472 0.498868921096 0.479306098203} O6 41 1 6 {} {0.558841844598 0.579394422353 0.505847180382} C5 42 1 6 {} {0.605081219956 0.774576353219 0.502917216599} C6 43 1 8 {} {0.648377901036 0.712952912731 0.347292728689} O7 44 1 8 {} {0.700059358207 0.765934206399 0.472758944644} O8 45 1 14 {} {0.646111903511 0.420875391928 0.451806812617} Si8 46 1 7 {} {0.600907511773 0.368406985003 0.469169699231} N4 47 1 14 {} {0.581451844232 0.319344372337 0.38083511945} Si9 48 1 14 {} {0.57578658788 0.364721818822 0.574646554097} Si10 49 1 7 {} {0.611734095058 0.384136798714 0.661831756074} N5 50 1 7 {} {0.615446114142 0.256321308869 0.3421306196} N6 51 1 1 {} {0.651242484 0.638699274202 0.575577819379} H22 52 1 1 {} {0.68944251516 0.619265706407 0.489834721565} H23 53 1 1 {} {0.62534564588 0.623657800547 0.323483837096} H24 54 1 1 {} {0.558401717159 0.570161319167 0.578144090053} H25 55 1 1 {} {0.53736845156 0.541822115846 0.473889138337} H26 56 1 1 {} {0.54404514657 0.628931443333 0.493648609809} H27 57 1 1 {} {0.604335128401 0.824891298665 0.473096542029} H28 58 1 1 {} {0.607082424164 0.780234062563 0.575897337901} H29 59 1 1 {} {0.57298115416 0.750501878607 0.487788645215} H30 60 1 1 {} {0.656567009825 0.750274034173 0.309196174782} H31 61 1 1 {} {0.700570192532 0.800386006092 0.517903262004} H32 62 1 1 {} {0.657439072741 0.415731620043 0.35453694554} H33 63 1 1 {} {0.685348773724 0.400529633957 0.506611712894} H34 64 1 1 {} {0.539362326352 0.288194944009 0.41380635693} H35 65 1 1 {} {0.572978616488 0.362555834822 0.301312243453} H36 66 1 1 {} {0.538452178048 0.413662141034 0.583066735364} H37 67 1 1 {} {0.559177158776 0.294910259893 0.587878405614} H38 68 1 1 {} {0.617311027045 0.43260647004 0.677636538135} H39 69 1 1 {} {0.638145238144 0.355069912018 0.676484130083} H40 70 1 1 {} {0.640199331321 0.267526322001 0.298463546627} H41 71 1 1 {} {0.625005858129 0.218275486503 0.383486972922} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end